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| Geographical names | Botanical scientific names | Biblical names | Nicknames | Institution names |
| Historical names | Zoological scientific names | Fictitious names | Pseudonyms |
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| Scientific Name | Malagasy Name |
| Habenaria elliotii | sinananga |
| Hackelochloa granularis | tsikalabana |
| Haematodendron glabrum | rarà, voararà, voararabe |
| Haematoxylum campechianum | sokan-kazo |
| Halleria ligustrifolia | kitoto, risarivokitra, sesesoy, tsatroy, tsatsoy |
| Haplocoelum perrieri | rimbondambo |
| Harpanema acuminatum | samatry, vahitandrokosy |
| Hartogiopsis trilobocarpa | befaroraotra |
| Harungana madagascariensis | arongana, dity, fohatra, haringana, haronga, harongambato, harongana, miangaroka |
| Harveya obtusifolia | parakinamboa, sarinatsipenala |
| Hazomalania voyronii | hazomalana, hazomalanga |
| Hazunta costata | hazompika |
| Hedycaryopsis madagascariensis | ambora, amborabe, tambonaika |
| Hedychium coronarium | sakamalaho, sakamalaobe, sakarivondambo |
| Hedysarum fruticulosum | famontifanivana |
| Helianthus annuus | tanamasoandro |
| Helichrysum abbayesii | ahitrandrianalahy, sava |
| Heliotropium curassavicum | mandavenoka |
| Helmiopsiella madagascariensis | hafotrampelambato, selivato, sely |
| Helmiopsis boivinii | mainaty, selivato |
| Hemarthria altissima | tsimatiloha, tsimatimpanarivo |
| Henonia scoparia | famafa, firoakosy, fofotsy, kafafa, kifafa, kifafahy, kifafalahy, kifafambohitra, sahondro, tsiavaramonina, tsibolo, tsimahatohantena, tsobolo |
| Heritiera littoralis | honkovavy, manangaranto, marovavy, mavoravy, moromona, moromony, roño, sangonakoholahy, vahona, varomby, varongy, voarona, voaroñy |
| Herminiera elaphroxylon | odifonga |
| Hernandia peltata | amongy, mongilahy, mongina, mongy |
| Herreriopsis elegans | bakapaka, bemandrimahazaka |
| Heteropogon contortus | ahedambo, ahidambo, ahimoso, boka, danga, lefondambo, lefonomby, tsevodambo |
| Hevea brasiliensis | fingotra, hazompingotra, hevea |
| Hiatula cepistipes | olabala |
| Hibbertia coriacea | anjavidilahy, antravidivavy, antravidy, fandrivala, fiandrivavala, tarantara, tarantaramadinidravina, vokovoko |
| Hibiscus abelmoschus | tambasotsa |
| Hieracium capense | anantahalaka, kiramborambo, kitsofatsofa, manajara |
| Hildegardia erythrosiphon | abiringa, aboringa, azotsipake, boaloaka, boramena, hafotravoanoano, hafotravonoana, hazontsilaky, moringa, tamotamokazo, vinoa |
| Hippocratea angustipetala | fanolehana, vahipindy |
| Hirneola auricula-judae | tadiniboalavo, tadinimpototra, tadinipototra |
| Holmskioldia madagascariensis | maimbitsika, ndiamoramanana |
| Homalium albiflorum | hazoadala, hazoambo, hazomainty, hazombato, hazombiby, janganitafotsy, lalipito, lalipitonala, lalompito, lohariana, malazavoavy, revy, takonandro, tratramborondreo, trongindambo, tsitakonandro |
| Hugonia castanea | indrapotsy |
| Humata repens | ahaka |
| Humbertianthus cardiostegius | ambavy, hafotrafotsiberavina, hafotrafotsy, kavilava, ombavy, tanatanampotsy, tanatanapotsy, voalava, voalelintrova |
| Humbertia madagascariensis | endraka, endrakendraka, endranendrana, hendrahendrana, hindrakindraka, indranindra, mera |
| Humbertiella henricii | seta |
| Humbertiodendron saboureaui | fandrianakanga, hazombaroranalahy, sadifitra |
| Humbertioturraea maculata | mampisarika, manampisaraka |
| Humbertiturraea sp. | tsilanjaha |
| Huperzia megastachya | kitongotrandraka, somoro, somorona |
| Hura crepitans | hazombary, hazomboay, voalazomboay |
| Hyacinthus cryptopodus | mangidihidihelika |
| Hybanthus buxifolius | anandrono |
| Hydnora esculenta | voantany |
| Hydrocotyle bonariensis | viliantsahona |
| Hydrostachys distichophylla | voniandria |
| Hydrotriche hottoniiflora | hotona, kisangandrano, kisangandranolahy, kotona, volonkotona |
| Hymenodictyon louhavato | lohavato |
| Hyparrhenia | lava-vero |
| Hypericum bojerianum | ahigoaika, anangoaika |
| Hyphaene coriacea | babangy, lokoko |
| Hypoestes arachnopus | voamangalety |
| Hypolytrum mauritianum | vindabe, vondronampaly |
| Hypoxis angustifolia | saonjonompanaraka |
| Hyptis pectinata | afolava, afolavalahy, kiafolava, kivoahazovoahazo, kivohazohazo, rombantsahona, rombatsahona, sangasanga, sangasanganandevolahy, sangasanganimarina, sansanganimarina, somolahotsy, tamborotsintsina, tongotaintaina, tsintsoapaiky, voamahombohitra, voarambitsahona |
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